Troubleshooting Guide: Fluorokine Flow Cytometry Kits

This protocol is intended as a guide only.

Fluorokine® Receptor Detection Kits are designed as alternative reagents for the detection of cell surface cytokine receptors by flow cytometry. Although the staining procedure of cells with this line of reagents is straight forward, some situations can present difficulties in data interpretation. In the table below, we attempt to point out some common problems that users of Fluorokine Receptor Detection Kits may encounter. The variable nature of cytometry instrumentation and instrument set-up can dramatically influence the quality of data generated with these reagents.

Cell surface receptor analysis involves the monitoring of protein structures that are in a dynamic equilibrium with their environment so changes in the medium such as pH, temperature, ionic strength, or presence of other proteins and/or cytokines will ultimately influence the binding properties of each labeled ligand. Lastly, the biological activity of labeled ligands can modulate a cell’s receptor density. We hope the tips below will help investigators overcome simple obstacles, but if additional help is required, we encourage you to contact our technical service department.

Problem: Cells do not stain with Fluorokine

Possible SourceTest or Action
Cell processing errorCheck all steps of the staining protocol to ensure proper cell processing
Cells were left on ice too long and receptors may have been downregulatedStain fresh cells
Cells may have lost or decreased receptor numbers during cultureUse another receptor positive cell line to test reagent or retest same cells at different cell cycle stages

Problem: Fluorokine stains known receptor negative cells

Possible SourceTest or Action
Voltage being applied to photomultiplier tubes on cytometer are set too highReduce PMT voltage until >95% of events fall in the first decade of the log scale
Concentration of Fluorokine in the reaction is too highDilute the Fluorokine and compare signal intensity against cells that do express receptors
Transfected cells have upregulated other cell surface structuresTest Fluorokine on non-transfected cells or on other transfectants using a different parent line

Problem: Blocking antibody does not give 100% inhibition of Fluorokine signal

Possible SourceTest or Action
Cells were not pre-treated with Ig to block Fc receptorsRepeat the test by first treating cells with mouse or human Ig to block Fc receptors

Problem: Inhibition of Fluorokine staining with unconjugated cytokine is not 100%

Possible SourceTest or Action
Fluorokine present at too high concentrationRepeat reaction using less Fluorokine
Addition of unconjugated cytokine upregulated receptorsPerform all reactions at 2 - 8° C and in the presence of metabolic blockers, e.g.: azide, cytochalasin B, etc.
Numerically the inhibition is not 100%Comparison of mean fluorescence intensity between the two conditions may reveal substantial inhibition

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