BDY TR-X, SE

Tocris Bioscience | Catalog # 5467

Orange/red BDY (BODIPY&#174 or boron-dipyrromethene) fluorescent dye for the labeling of amines; supplied as NHS ester
Tocris Bioscience
Discontinued Product
5467 has been discontinued. View all Fluorescent Dyes products.

Key Product Details

Description

Orange/red BDY (BODIPY® or boron-dipyrromethene) fluorescent dye for the labeling of amines; supplied as NHS ester

Wavelength

Excitation = 588 nm, Emission = 616 nm

Product Description

BDY TR-X, SE is a fluorescent orange BDY (BODIPY® or boron-dipyrromethene) dye for the labeling of amines. Exhibits similar excitation and emission spectra to dye Texas Red®. Displays high fluorescence quantum yield and high extinction coefficient and is relatively insensitive to pH change. This dye contains a seven-atom aminohexanoyl ("X") spacer between the fluorophore and the NHS ester group, reducing the potential for interactions between the fluorophore and conjugated biomolecule. The hydrophobic nature of BDY TR-X makes it ideal for labeling lipids and cell membranes. BDY TR-X also exhibits narrow emission bandwidths and has a relatively long excited-state lifetime, making it ideal for fluorescence polarization assays and two-photon excitation (TPE) microscopy. Excitation maximum ~588 nM; emission maximum ~616 nM.

For more information on how BDY TR-X, SE may be used, see our protocol: Conjugation Protocol for Amine Reactive Dyes.

BODIPY® is a registered trademark of Molecular Probes.

Optical Data

BDY TR-X, SE Dye Spectra
Emission Color Orange
λabs 588 nm
λem 616 nm
Extinction Coefficient (ε) 68000 M-1cm-1
Quantum Yield (φ) 0.9
Reactive Group NHS ester
Reactivity Primary amines
Cell Permeable No
Correction Factor 260 0.15
Correction Factor 280 0.19
Application Confocal fluorescence p, fluorescence polarization assays and two-photon excitation (TPE) microscopy
Alternative For 5-TAMRA; Alexa Fluor 555; DyLight 549; TRITC

Spectra Viewer

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Product Specifications for BDY TR-X, SE

Molecular Weight

634.46

Formula

C31H29BF2N4O6S

Storage

Store at -20°C

Purity

≥95% (HPLC)

Chemical Name

(T-4)-[N-[6-[(2,5-Dioxo-1-pyrrolidinyl)oxy]-6-oxohexyl]-2-[4-[5-[[5-(2-thienyl)-2H-pyrrol-2-ylidene-κN]methyl]-1H-pyrrol-2-yl-κN]phenoxy]acetamidato]difluoroboron

CAS Number

197306-80-2

PubChem ID

10145996

InChI Key

NCYPKNAEMUYMBG-UHFFFAOYSA-N

SMILES

F[B-]1(F)[N+]2=C(C=CC2=CC3=CC=C(C4=CC=CS4)N13)C5=CC=C(OCC(NCCCCCC(ON6C(CCC6=O)=O)=O)=O)C=C5

The technical data provided above is for guidance only. For batch specific data refer to the Certificate of Analysis.

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Solubility

Solvent Max Conc. mg/mL Max Conc. mM
Solubility
DMSO 63.45 100

Preparing Stock Solutions for BDY TR-X, SE

The following data is based on the product molecular weight 634.46.

Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which all affect the solvent volumes required to prepare stock solutions.

Select a batch to recalculate based on the batch molecular weight:

Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
1 mM 1.58 mL 7.88 mL 15.76 mL
5 mM 0.32 mL 1.58 mL 3.15 mL
10 mM 0.16 mL 0.79 mL 1.58 mL
50 mM 0.03 mL 0.16 mL 0.32 mL

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Background References

References are publications that support the biological activity of the product.

Product Documents for BDY TR-X, SE

Certificate of Analysis

To download a Certificate of Analysis, please enter a lot or batch number in the search box below.

Product Specific Notices for BDY TR-X, SE

For research use only

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