Cy5B-trisulfo, NHS

Tocris Bioscience | Catalog # 7394

Restricted conformation cyanine dye with high quantum yield and long fluorescence lifetime for advanced microscopy applications
Tocris Bioscience
Discontinued Product
7394 has been discontinued. View all Fluorescent Dyes products.

Key Product Details

Description

Restricted conformation cyanine dye with high quantum yield and long fluorescence lifetime for advanced microscopy applications

Wavelength

Excitation = 669 nm, Emission = 685 nm

Product Description

Key information:

Cy5B-trisulfo, NHS is a far-red fluorescent dye; supplied with an NHS ester reactive group for the labeling of primary amines. Particularly useful for smFRET experiments to reduce blinking and bleaching artefacts and maintain correct mean FRET efficiencies.

Application: FRET, smFRET, FLIM, TIRF, and super resolution microscopy (SRM) techniques, including dSTORM. Provides enhanced spatial resolution in dSTORM experiments. Does not provide efficient blinking in conventional high-thiol dSTORM buffers; instead, sodium borohydride (NaBH4) addition is required following which SMLM experiments can be performed in PBS.

Properties and Photophysical Data: Excitation and emission maxima (λ) are 669 nm and 685 nm, respectively; extinction coefficient = 241,000 M-1cm-1; quantum yield = 0.4; fluorescence lifetime = 1.85 ns.

We suggest making up a 10 mM stock solution of this product in anhydrous DMSO.

For more information on how Cy5B-trisulfo, NHS may be used, see our protocol: Conjugation Protocol for Amine Reactive Dyes.

Scientific Data Images for Cy5B-trisulfo, NHS

Application of Cy5B-trisulfo, NHS in COS7.

Application of Cy5B-trisulfo, NHS in COS7.

FLIM composite image of a COS7 cell immunostained with mouse anti-beta -tubulin primary and Cyanine 5 labelled secondary (green), and rabbit anti-clathrin primary plus Cy5B-trisulfo, NHS labelled secondary (yellow-red). Scale bars, 5 μm and 1 μm (insets). Image kindly provided by Dr. Martin Schnermann, Center for Cancer Research, National Cancer Institute.
Application of Cy5B-trisulfo, NHS in microtubules.

Application of Cy5B-trisulfo, NHS in microtubules.

Single-molecule localization microscopy (SMLM) images obtained using TIRF microscopy of microtubules immunolabeled with Cy5B-trisulfo, NHS labeled anti-tubulin antibody in 0.1% NaBH4/PBS upon irradiation with 640 nm (2.5 kWcm-2 ) using an integration time of 20 ms (total acquisition time 10 min). Scale bars, 3 μm and 1 μm (insets). Fourier ring correlation (FRC) analysis was used to estimate the indicated spatial resolutions. Image kindly provided by Dr. Martin Schnermann, Center for Cancer Research, National Cancer Institute.

Licensing Information

Sold under license from the National Institute of Health

Optical Data

Emission Color Far Red
λabs 669 nm
λem 685 nm
Extinction Coefficient (ε) 241,000 M-1cm-1
Quantum Yield (φ) 0.4
Closest Laser line 640 nm
Reactive Group NHS ester
Reactivity Primary amines
Application SMLM, FRET, smFRET, FLIM, dSTORM

Spectra Viewer

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Use our spectra viewer to interactively plan your experiments, assessing multiplexing options. View the excitation and emission spectra for our fluorescent dye range and other commonly used dyes.

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Product Specifications for Cy5B-trisulfo, NHS

Molecular Weight

1055.11

Formula

C47H52N4Na2O15S3

Storage

Store at -20°C

InChI Key

WHRLQGVVUOKRRS-IOAHUSCESA-L

SMILES

CC1(C)C2=C(C=CC(S(=O)(O[Na])=O)=C2)N(CC[C@@]3([H])C[C@@]4([H])O[C@@]5([H])CC6)C1=C3C=C4C=C5C7=[N+]6C8=C(C=C(S(=O)([O-])=O)C=C8)C7(CCCCC(N(CCC(ON9C(CCC9=O)=O)=O)CCCS(=O)(O[Na])=O)=O)C

The technical data provided above is for guidance only. For batch specific data refer to the Certificate of Analysis.

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Background References

References are publications that support the biological activity of the product.

Product Documents for Cy5B-trisulfo, NHS

Certificate of Analysis

To download a Certificate of Analysis, please enter a lot or batch number in the search box below.

Product Specific Notices for Cy5B-trisulfo, NHS

For research use only

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