Janelia Fluor® 646, Haloalkane

Tocris Bioscience | Catalog # 8809

Cell-permeable fluorogenic fluorescent dye with a chloroalkane handle. Application: live-cell imaging as a self-labeling tag substrate
Tocris Bioscience
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Key Product Details

Description

Cell-permeable fluorogenic fluorescent dye with a chloroalkane handle. Application: live-cell imaging as a self-labeling tag substrate

Wavelength

Excitation = 646 nm, Emission = 664 nm

Product Description

Key Information: Janelia Fluor® 646, Haloalkane is a red cell-permeable fluorogenic fluorescent dye with a chloroalkane handle.

Application: Live-cell imaging as a self-labeling tag substrate. Suitable for confocal microscopy, light sheet microscropy, super resolution microscopy (SRM) techniques including dSTORM (in both live and fixed cells). Stable to fixation. Cell permeable.

Properties and Photophysical Data: Janelia Fluor® 646, Haloalkane shows a high degree of fluorogenicity. Excitation and emission maxima (λ) are 646 nm and 664 nm, respectively; quantum yield = 0.54; extinction coefficient = 152,000 M-1cm-1 (measured in ethanol or TFE plus 0.1% TFA); lactone-zwitterion equilibrium constant (KL-Z) = 0.0012. Exhibits low non-specific background staining.

Janelia Fluor® is a registered trademark of Howard Hughes Medical Institute.

Licensing Information

Sold under license from the Howard Hughes Medical Institute, Janelia Research Campus

Optical Data

Janelia Fluor<sup>®</sup> 646, Haloalkane Dye Spectra
Emission Color Red
Brightness
λabs 646 nm
λem 664 nm
Extinction Coefficient (ε) 152.000 M-1cm-1
Quantum Yield (φ) 0.54
Closest Laser line 640 nm
Cell Permeable Yes
Application Confocal Microscopy, Super Resolution Microscopy (SRM)

Spectra Viewer

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Product Specifications for Janelia Fluor® 646, Haloalkane

Molecular Weight

702.36

Formula

C39H48ClN3O5Si

Storage

Store at -20°C

Purity

≥95% (HPLC)

Chemical Name

2-(3-(Azetidin-1-ium-1-ylidene)-7-(azetidin-1-yl)-5,5-dimethyl-3,5-dihydrodibenzo[b,e]silin-10-yl)-4-((2-(2-((6-chlorohexyl)oxy)ethoxy)ethyl)carbamoyl)benzoate

CAS Number

1811539-60-2

PubChem ID

140879850

InChI Key

JTUASFVODQQZCA-UHFFFAOYSA-N

SMILES

O=C(NCCOCCOCCCCCCCl)C1=CC=C(C([O-])=O)C(C(C2=CC=C(N3CCC3)C=C2[Si]4(C)C)=C(C=C/5)C4=CC5=[N+]6CCC\6)=C1

The technical data provided above is for guidance only. For batch specific data refer to the Certificate of Analysis.

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Solubility

Solvent Max Conc. mg/mL Max Conc. mM
Solubility
DMSO 7.02 10

Preparing Stock Solutions for Janelia Fluor® 646, Haloalkane

The following data is based on the product molecular weight 702.36.

Batch specific molecular weights may vary from batch to batch due to the degree of hydration, which all affect the solvent volumes required to prepare stock solutions.

Select a batch to recalculate based on the batch molecular weight:

Concentration / Solvent Volume / Mass 1 mg 5 mg 10 mg
0.1 mM 14.24 mL 71.19 mL 142.38 mL
0.5 mM 2.85 mL 14.24 mL 28.48 mL
1 mM 1.42 mL 7.12 mL 14.24 mL
5 mM 0.28 mL 1.42 mL 2.85 mL

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Background References

References are publications that support the biological activity of the product.

Product Documents for Janelia Fluor® 646, Haloalkane

Certificate of Analysis

To download a Certificate of Analysis, please enter a lot or batch number in the search box below.

Product Specific Notices for Janelia Fluor® 646, Haloalkane

For research use only

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