Hoechst 33342
Chemical Name: 2'-(4-Ethoxyphenyl)-5-(4-methyl-1-piperazinyl)-2,5'-bi-1H-benzimidazole trihydrochloride
Purity: ≥98%
Biological Activity
Hoechst 33342 stains and binds minor groove of AT-rich regions. Used to quantify DNA in viable cells. Cell permeable fluorescent DNA dye.Scientific Data

Application of Hoechst 33342 in HeLa cells. Fluorescence microscopy image of GLUT4-EGFP HeLa cells treated with Hoechst 33342. Colors: green (GLUT4-EGFP), red (SCOTfluor glucose probe 510 (100 μm); Catalog # 7447), blue (Hoechst 33342). Image kindly provided by Dr Sam Benson, Centre for Inflammation Research, University of Edinburgh.
Optical Data for Hoechst 33342
λabs | 350 nm |
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λem | 461 nm |
Cell Permeable | Yes |
Application | Flow Cytometry, Confocal imaging |
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Spectral ViewerTechnical Data
The technical data provided above is for guidance only.
For batch specific data refer to the Certificate of Analysis.
Tocris products are intended for laboratory research use only, unless stated otherwise.
Background References
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Assignment of DNA binding sites for 4',6-diamidine-2-phenylindole and bisbenzimide (Hoechst 33258). A comparative footprinting study.
Portugal and Waring
Biochim.Biophys.Acta., 1988;949:158 -
Simultaneous quantitation of Hoechst 33342 and immunofluorescence on viable cells using a fluorescence activated cell sorter.
Loken
Cytometry, 1980;1:136
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Citations for Hoechst 33342
The citations listed below are publications that use Tocris products. Selected citations for Hoechst 33342 include:
3 Citations: Showing 1 - 3
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SIGMAR1/Sigma-1 receptor ablation impairs autophagosome clearance.
Authors: Yang Et al.
Autophagy 2019;:1
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Subcutaneous Inoculation of 3D Pancreatic Cancer Spheroids Results in Development of Reproducible Stroma-Rich Tumors.
Authors: Durymanov Et al.
Transl Oncol 2019;12:180
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Microtubule-Actomyosin Mechanical Cooperation during Contact Guidance Sensing.
Authors: Tabdanov Et al.
Cell Rep 2018;25:328
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Hoechst was used for nuclear staining. Add stain at 1 ug/mL and incubate cells at room temperature for 10 minutes.
I used this dye to stain the nucleus of live cells. After making the stock solution, diluted the dye 1:1000 ratio in the culture media/PBS and added to cells and incubated for 5 mins.