Janelia Fluor® 549, SE

Catalog # Availability Size / Price Qty
6147/2
Cat.No. 6147 - Janelia Fluor 549, SE | C31H25N3O7 | CAS No. 1811539-32-8
1 Image
Description: Cell permeable yellow fluorescent dye; supplied as NHS ester
Alternative Names: JF 549, NHS

Chemical Name: 3,6-Di-1-azetidinyl-9-[2-carboxy-5-[[(2,5-dioxo-1-pyrrolidinyl)oxy]carbonyl]phenyl]xanthylium, inner salt

Product Details
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Biological Activity

Fluorescent dye; supplied as an NHS ester for coupling to primary amine groups. Compatible with self-labeling tag systems, e.g. HaloTag® and SNAP-tag®. Suitable for confocal fluorescent imaging and super resolution microscopy (SRM) techniques, such as dSTORM (live and fixed cells) and STED. Cell permeable. Excitation maximum = 549 nm; emission maximum = 571 nm; Quantum yield = 0.88; Extinction coefficient = 101,000 M-1cm-1; A280 correction factor is 0.169.

We also offer Janelia Fluor® conjugated antibodies and custom conjugation services with our sister company Novus Biologicals.

HaloTag is a trademark of Promega Corporation, and SNAP-tag is a trademark of New England BioLabs, Inc.

Application of Janelia Fluor® Dyes in Cardiac Tissue

Application of Janelia Fluor® Dyes in Cardiac Tissue

Application of Janelia Fluor® Dyes in Cardiac Tissue - Left image - Widefield fluorescence image of muscle tissue from an adult pig heart, displaying the distribution of collagen VI in the interstitial space between heart muscle cells. This sample was labelled with a primary antibody against collagen VI and a secondary antibody conjugated to JF549 (Cat.No. 6147). Scale bar: 50 μm. Middle image - An adult pig heart tissue section, 10 μm thick, labelled with antibodies against SERCA2ATPase, exhibits the intricate structure of the sarcoplasmic reticulum. A super-resolution image (top panel), obtained by exploiting spontaneous photo-switching of JF549 (dSTORM), shows far superior detail than the diffraction limited widefield image (bottom). Scale bar: 200 nm. Right image - A single isolated Wistar rat cardiomyocyte stained against α-actinin, displaying its periodic structure localised at the ends of sarcomeres (Z-discs). Widefield fluorescence of JF549 (left panel), prior to illuminating with a 561 nm laser to induce photoswitching and produce a dSTORM super-resolution image (right). Scale bar: 1 μm.

All images kindly provided by Prof. Christian Soeller, University of Exeter; acquired by Alex Clowsley and Anna Meletiou.

Spectra charts
Emission colorYellow
Brightness
λabs549 nm
λem571 nm
Extinction coefficient (ε)101,000 M-1cm-1
Quantum yield (φ)0.88
Closest Laser line532 nm
Alternative forAlexa Fluor® 546, Alexa Fluor® 555, Atto 550, BDY TMR-X, CF555, TAMRA, Cyanine 3

Alexa Fluor® is a registered trademark of Molecular Probes, Inc, a Thermo Fisher Scientific Company.

Technical Data

M.Wt:
551.56
Formula:
C31H25N3O7
Solubility:
Soluble to 100 mM in DMSO and to 100 mM in DMF
Storage:
Store at -20°C
CAS No:
1811539-32-8

The technical data provided above is for guidance only. For batch specific data refer to the Certificate of Analysis.
Tocris products are intended for laboratory research use only, unless stated otherwise.

Additional Information

Licensing Caveats:
Sold under license from the Howard Hughes Medical Institute, Janelia Research Campus

Product Datasheets

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