Ecotin is a potent and general inhibitor of serine proteases with diverse substrate specificities (1). It strongly inhibits trypsin, chymotrypsin, elastase, factor Xa, plasma kallikrein, u-plasminogen activator, granzyme B, and factor XIIa. Immobilized Ecotin has been used to affinity-purify recombinant trypsinogen, indicating that it may also be used to purify additional serine protease zymogens (2). Compared to other serine protease inhibitors such as members of the serpin family, the reactive site of Ecotin is Met104 (P1) (3). Ecotin is synthesized as a 162 amino acid precursor with a 20 amino acid signal peptide necessary to direct it to the periplasmic space. The mature protein (residues 21‑162) is expressed and purified.
Recombinant E. coli Ecotin Protein, CF
R&D Systems | Catalog # 1328-PI
Key Product Details
- R&D Systems E. coli-derived Recombinant E. coli Ecotin Protein (1328-PI)
- Quality control testing to verify active proteins with lot specific assays by in-house scientists
- All R&D Systems proteins are covered with a 100% guarantee
Source
Accession Number
Applications
Product Specifications
Source
Ala21-Arg162, with a C-terminal 6-His tag
Purity
Endotoxin Level
N-terminal Sequence Analysis
Predicted Molecular Mass
SDS-PAGE
Activity
Measured by its ability to inhibit trypsin cleavage of a fluorogenic peptide substrate, Mca-RPKPVE-Nval-WRK(Dnp)-NH2 (Catalog # ES002).
The IC50 value is <1.0 nM, as measured under the described conditions.
Formulation, Preparation, and Storage
1328-PI
| Formulation | Lyophilized from a 0.2 μm filtered solution in Tris and NaCl. |
| Reconstitution | Reconstitute at 100 μg/mL in sterile 25 mM Tris and 350 mM NaCl, pH 8.5. |
| Shipping | The product is shipped with polar packs. Upon receipt, store it immediately at the temperature recommended below. |
| Stability & Storage | Use a manual defrost freezer and avoid repeated freeze-thaw cycles.
|
Calculators
Background: Ecotin
References
- McGrath, M.E. et al. (1995) Protein Sci. 4:141.
- Lengyel, Z. et al. (1998) Protein Expre. Purif. 12:291.
- McGrath, M.E. et al. (1991) J. Biol. Chem. 28:6620.
Gene Symbol
UniProt
Additional Ecotin Products
Product Documents for Recombinant E. coli Ecotin Protein, CF
Certificate of Analysis
To download a Certificate of Analysis, please enter a lot or batch number in the search box below.
Note: Certificate of Analysis not available for kit components.
Product Specific Notices for Recombinant E. coli Ecotin Protein, CF
For research use only
Related Research Areas
Citations for Recombinant E. coli Ecotin Protein, CF
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Protocols
View specific protocols for Recombinant E. coli Ecotin Protein, CF (1328-PI):
- Assay Buffer: 50 mM Tris, 0.15 M NaCl, 10 mM CaCl2, 0.05% (w/v) Brij-35, pH 7.5 (TCNB)
- Recombinant E. coli Ecotin (reEcotin) (Catalog # 1328-PI)
- Trypsin (Sigma, Catalog # T-1426)
- Fluorogenic Peptide Substrate: MCA-Arg-Pro-Lys-Pro-Val-Glu-NVal-Trp-Arg-Lys(DNP)-NH2 (Catalog # ES002), 2 mM stock in DMSO
- F16 Black Maxisorp Plate (Nunc, Catalog # 475515)
- Plate Reader (Model: SpectraMax Gemini by Molecular Devices) or equivalent
- Dilute Trypsin to 0.25 μg/mL in Assay Buffer.
- Prepare a curve of reEcotin (MW: 17,042 Da) in Assay Buffer. Make serial dilutions of: 200, 100, 40, 20, 16, 10, 4 and 1.6 nM.
- Combine equal volumes of the reEcotin curve dilutions and the diluted active Trypsin. Include a control (in duplicate) containing Assay Buffer and the diluted active Trypsin.
- Incubate mixtures at room temperature for 30 minutes.
- Perform 1:5 dilutions of reaction mixture with Assay Buffer.
- Dilute fluorogenic peptide substrate to 20 μM in Assay Buffer.
- Load in a black well plate 50 μL of the incubated mixtures, and start the reaction by adding 50 μL of 20 μM substrate.
- Read at excitation and emission wavelengths of 320 nm and 405 nm (top read), respectively in kinetic mode for 5 minutes.
- Derive the 50% inhibition concentration (IC50) for reEcotin by plotting RFU/min (or specific activity) vs. concentration with 4-PL fitting.
- The specific activity for Trypsin at each point may be determined using the following formula (if needed):
|
Specific Activity (pmol/min/µg) = |
Adjusted Vmax* (RFU/min) x Conversion Factor** (pmol/RFU) |
| amount of enzyme (µg) |
*Adjusted for Substrate Blank
**Derived using calibration standard MCA-Pro-Leu-OH (Bachem, Catalog # M-1975).
Per Well:
- Trypsin: 0.00125 μg
- reEcotin: 10, 5.0, 2.0, 1.0, 0.8, 0.5, 0.2, 0.08 nM
- Substrate: 10 μM