Histone H3 [ac Lys9] Antibody (PSH04-47)

Novus Biologicals | Catalog # NBP3-32430

Recombinant Monoclonal Antibody
Novus Biologicals
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Key Product Details

Species Reactivity

Human, Mouse, Rat

Applications

Immunohistochemistry, Immunohistochemistry-Paraffin, Western Blot, Flow Cytometry, Immunocytochemistry/ Immunofluorescence, Chromatin Immunoprecipitation, Dot Blot

Label

Unconjugated

Antibody Source

Recombinant Monoclonal Rabbit IgG Clone # PSH04-47 expressed in HEK293
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Product Specifications

Immunogen

Synthetic peptide within human Histone H3 (ac Lys 9) aa 1-50. (Uniprot: P68431)

Modification

ac Lys 9

Localization

Nucleus, Chromosome.

Clonality

Monoclonal

Host

Rabbit

Isotype

IgG

Theoretical MW

15 kDa.
Disclaimer note: The observed molecular weight of the protein may vary from the listed predicted molecular weight due to post translational modifications, post translation cleavages, relative charges, and other experimental factors.

Scientific Data Images for Histone H3 [ac Lys9] Antibody (PSH04-47)

Histone H3 [ac Lys9] Antibody (PSH04-47)

Immunoprecipitation: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Immunoprecipitation: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Histone H3 (acetyl K9) was immunoprecipitated from 0.2 mg HeLa cell lysate with NBP3-32430 at 2 ug/25 ul agarose. Western blot was performed from the immunoprecipitate using NBP3-32430 at 1/2,000 dilution. Anti-Rabbit IgG for IP Nano-secondary antibody at 1/5,000 dilution was used for 1 hour at room temperature.

Lane 1: HeLa cell lysate (input)
Lane 2: NBP3-32430 IP in HeLa cell lysate
Lane 3: Rabbit IgG instead of NBP3-32430 in HeLa cell lysate

Blocking/Dilution buffer: 5% NFDM/TBST
Exposure time: 18 seconds; ECL
Histone H3 [ac Lys9] Antibody (PSH04-47)

Chromatin Immunoprecipitation: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Chromatin Immunoprecipitation: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Chromatin immunoprecipitations were performed with cross-linked chromatin from HeLa cells and Histone H3 (NBP3-32430) / Normal Rabbit IgG according to the ChIP protocol. The enriched DNA was quantified by real-time PCR using indicated primers. The amount of immunoprecipitated DNA in each sample is represented as signal relative to the total amount of input chromatin, which is equivalent to one.
Histone H3 [ac Lys9] Antibody (PSH04-47)

Dot Blot: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Dot Blot: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Dot blot analysis of Histone H3 on different proteins with Rabbit anti-Histone H3 antibody (NBP3-32430) at 1/1,000 dilution. Goat Anti-Rabbit IgG - HRP Secondary Antibody at 1/50,000 dilution for 1 hour at room temperature.

Lane 1: Unmodified Histone H3 (negative)
Lane 2: Mono-Methyl-Histone H3 (Lys9) (negative)
Lane 3: Tri-Methyl-Histone H3 (Lys9) (negative)
Lane 4: Acetyl-Histone H3 (Lys9) (positive)
Lane 5: Acetyl-Histone H3 (Lys4) (negative)
Lane 6: Acetyl-Histone H3 (Lys27) (negative)

Proteins loading: 100ng, 25ng, 5ng;

Blocking and dilution buffer: 5% NFDM/TBST;

Exposure time: 30 seconds; ECL.
Histone H3 [ac Lys9] Antibody (PSH04-47)

Immunohistochemistry: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Immunohistochemistry: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Immunohistochemical analysis of paraffin-embedded human stomach tissue with Rabbit anti-Histone H3 antibody (NBP3-32430) at 1/2,000 dilution.

The section was pre-treated using heat mediated antigen retrieval with sodium citrate buffer (pH 6.0) for 2 minutes. The tissues were blocked in 1% BSA for 20 minutes at room temperature, washed with ddH2O and PBS, and then probed with the primary antibody at 1/2,000 dilution for 1 hour at room temperature. The detection was performed using an HRP conjugated compact polymer system. DAB was used as the chromogen. Tissues were counterstained with hematoxylin and mounted with DPX.
Histone H3 [ac Lys9] Antibody (PSH04-47)

Immunocytochemistry/ Immunofluorescence: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Immunocytochemistry/ Immunofluorescence: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Immunocytochemistry analysis of C6 cells labeling Histone H3 with Rabbit anti-Histone H3 antibody (NBP3-32430) at 1/10,000 dilution.

Cells were fixed in 4% paraformaldehyde for 20 minutes at room temperature, permeabilized with 0.1% Triton X-100 in PBS for 5 minutes at room temperature, then blocked with 1% BSA in 10% negative goat serum for 1 hour at room temperature. Cells were then incubated with Rabbit anti-Histone H3 antibody at 1/10,000 dilution in 1% BSA in PBST overnight at 4 ℃. Goat Anti-Rabbit IgG H&L (iFluor™ 488) was used as the secondary antibody at 1/1,000 dilution. PBS instead of the primary antibody was used as the secondary antibody only control. Nuclear DNA was labelled in blue with DAPI.

Beta tubulin (red) was stained at 1/100 dilution overnight at +4℃. Goat Anti-Mouse IgG H&L (iFluor™ 594) was used as the secondary antibody at 1/1,000 dilution.
Histone H3 [ac Lys9] Antibody (PSH04-47)

Flow Cytometry: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Flow Cytometry: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Flow cytometric analysis of HeLa cells labeling Histone H3.

Cells were fixed and permeabilized. Then stained with the primary antibody (NBP3-32430, 1μg/mL) (red) compared with Rabbit IgG Isotype Control (green). After incubation of the primary antibody at +4℃ for an hour, the cells were stained with a iFluor™ 488 conjugate-Goat anti-Rabbit IgG Secondary antibody at 1/1,000 dilution for 30 minutes at +4℃. Unlabelled sample was used as a control (cells without incubation with primary antibody; black).
Histone H3 [ac Lys9] Antibody (PSH04-47)

Western Blot: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430]

Western Blot: Histone H3 [ac Lys9] Antibody (PSH04-47) [NBP3-32430] - Western blot analysis of Histone H3 on different lysates with Rabbit anti-Histone H3 antibody (NBP3-32430) at 1/1,000 dilution.
Lane 1: HeLa cell lysate
Lane 2: HeLa treated with 500ng/mL TSA for 4 hours cell lysate
Lane 3: NIH/3T3 cell lysate
Lane 4: NIH/3T3 treated with 400nM TSA for 18 hours cell lysate
Lane 5: C6 cell lysate
Lane 6: C6 treated with 1μM TSA for 18 hours cell lysate

Lysates/proteins at 20 µg/Lane.

Predicted band size: 15 kDa
Observed band size: 15 kDa

Exposure time: 6 seconds; ECL;
4-20% SDS-PAGE gel.

Proteins were transferred to a PVDF membrane and blocked with 5% NFDM/TBST for 1 hour at room temperature. The primary antibody at 1/1,000 dilution was used in 5% NFDM/TBST at 4℃ overnight. Goat Anti-Rabbit IgG - HRP Secondary Antibody at 1/50,000 dilution was used for 1 hour at room temperature.

Applications for Histone H3 [ac Lys9] Antibody (PSH04-47)

Application
Recommended Usage

Chromatin Immunoprecipitation

Use 0.5-2 ug for 25 ug of chromatin

Dot Blot

1:1000

Flow Cytometry

1:1000

Immunocytochemistry/ Immunofluorescence

1:5000-1:15000

Immunohistochemistry-Paraffin

1:1000

Western Blot

1:1000

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Advanced Features

  • Spectra Viewer - Custom analysis of spectra from multiple fluorochromes
  • Spillover Popups - Visualize the spectra of individual fluorochromes
  • Antigen Density Selector - Match fluorochrome brightness with antigen density
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Formulation, Preparation, and Storage

Purification

Protein A purified

Formulation

PBS (pH7.4), 0.1% BSA and 40% Glycerol

Preservative

0.05% Sodium Azide

Concentration

1 mg/ml

Shipping

The product is shipped with polar packs. Upon receipt, store it immediately at the temperature recommended below.

Stability & Storage

Store at 4C short term. Aliquot and store at -20C long term. Avoid freeze-thaw cycles.

Background: Histone H3

Chromatin is an arrangement of DNA and proteins which form chromosomes. Chromatin is formed from nucleosomes, which are comprised of a set of four histone proteins (H2A, H2B, H3, H4) wrapped with DNA. Chromatin is very dynamic, where post-translational modifications can regulate DNA to be copied, transcribed, or repaired.

Histones are nuclear proteins responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Changes in chromatin structure play a large role in the regulation of transcription. The chromatin fibers are compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures.

Common histone modifications include methylation of lysine and arginine, acetylation of lysine, phosphorylation of threonine and serine, and sumoylation, biotinylation, and ubiquitylation of lysine. Posttranslational modifications such as acetylation of core histones regulates gene expression, thus altering protein function and regulation (1). Histone H3 is primarily acetylated at lysines 9, 14, 18, and 23 and have a theoretical molecular weight of 15 kDa. Acetylation at lysine 9 and 14 appears to control histone deposition, chromatin assembly and active transcription. Methylation of arginine residues within histone H3 has also been linked to transcription regulation. Histone H3 has been linked to various types of cancer as a biomarker through the aberrant expression of histone deacetylase (HDAC) enzymes and changes to chromatins (2-4).

References

1. Zhang, Y. X., Akumuo, R. C., Espana, R. A., Yan, C. X., Gao, W. J., & Li, Y. C. (2018). The histone demethylase KDM6B in the medial prefrontal cortex epigenetically regulates cocaine reward memory. Neuropharmacology, 141, 113-125. doi:10.1016/j.neuropharm.2018.08.030

2. Nandakumar, V., Hansen, N., Glenn, H. L., Han, J. H., Helland, S., Hernandez, K,...Meldrum, D. R. (2016). Vorinostat differentially alters 3D nuclear structure of cancer and non-cancerous esophageal cells. Sci Rep, 6, 30593. doi:10.1038/srep30593

3. Zhou, M., Li, Y., Lin, S., Chen, Y., Qian, Y., Zhao, Z., & Fan, H. (2019). H3K9me3, H3K36me3, and H4K20me3 Expression Correlates with Patient Outcome in Esophageal Squamous Cell Carcinoma as Epigenetic Markers. Dig Dis Sci, 64(8), 2147-2157. doi:10.1007/s10620-019-05529-2

4. Li, Y., Guo, D., Sun, R., Chen, P., Qian, Q., & Fan, H. (2019). Methylation Patterns of Lys9 and Lys27 on Histone H3 Correlate with Patient Outcome in Gastric Cancer. Dig Dis Sci, 64(2), 439-446. doi:10.1007/s10620-018-5341-8

Alternate Names

H3F3A

Gene Symbol

H3C14

Additional Histone H3 Products

Product Documents for Histone H3 [ac Lys9] Antibody (PSH04-47)

Certificate of Analysis

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Product Specific Notices for Histone H3 [ac Lys9] Antibody (PSH04-47)

This product is for research use only and is not approved for use in humans or in clinical diagnosis. Primary Antibodies are guaranteed for 1 year from date of receipt.

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Protocols

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