Simple Plex Assays for Cancer Research

The secreted proteins that govern tumor biology including cytokines and chemokines driving tumor-immune crosstalk, checkpoint proteins tuning immune evasion, angiogenic factors fueling vascularization, and cytotoxicity markers reporting immune-mediated tumor killing, hold the answers to how tumors progress, evade, and respond. Cancer rarely speaks through a single biomarker; it signals through networks of interacting proteins. Reading those signals together accurately, and reproducibly enough to trust, is what separates a validated signature from an unrepeatable one. 

Simple Plex assays on Ella platform quantify multiple biomarkers in parallel from a single sample, across serum, plasma, and cell culture supernatants in a fully automated workflow that returns publication-ready data in 90 minutes. Explore the key oncology and immuno-oncology research areas below to find the Simple Plex assays matched to your studies.

Selected Publications | Related Assays | Resources

Angiogenesis and Tumor Progression

Angiogenesis supports tumor growth by supplying oxygen and nutrients while facilitating invasion and metastatic spread. Profiling pro- and anti-angiogenic factors, vascular signaling proteins, and extracellular matrix-remodeling markers can help characterize tumor progression, investigate tumor–vascular interactions, and evaluate the effects of pathway-targeted therapies in oncology research models

Relevant Simple Plex Assays 

Human Analytes 
Angiopoietin-1Angiopoietin-2Angiopoietin-like 3Angiopoietin-like 4
Chitinase 3-like 1/YKL-40 EGF Endoglin/CD105   Endothelin-1 
FGF-2 HGFHGF R/c-METPDGF
Placenta Growth Factor (PIGF) TIMP1TIMP-2Thrombospondin-1
VEGF-AVEGF-BVEGF-CVEGF-D
VEGFR1/Flt-1VEGFR2/KDR  
Mouse Analytes
Angiopoietin-2Angiopoietin-like 3Chitinase 3-like 1VEGF-A
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Featured Publication

Pretreatment Circulating Vascular Biomarkers Predict Cancer Therapy–Related Cardiac Dysfunction During HER2+ Breast Cancer Treatment

Apoptosis & Senescence

Characterizing tumor-cell death, cellular senescence, and immune-mediated cytotoxicity provides insight into tumor biology and the functional activity of T cells, NK cells, and other immune effectors. Profiling biomarkers associated with apoptosis, senescence, cytolytic activity, and immune-cell activation can help elucidate mechanisms of action and investigate treatment response in oncology research models.

Relevant Simple Plex Assays 

Human Analytes 
BAFF/BLyS/TNFSF13B   BCMA/TNFRSF17   Caspase-1 CD27/TNFRSF7 
DcR3/TNFRSF6B   Fas/TNFRSF6/CD95   Fas Ligand/TNFSF6   HVEM/TNFRSF14   
LIGHT/TNFSF14   NGFR/TNFRSF16Osteoprotegerin /TNFRSF11B OX40     
TACI/TNFRSF13B       Thrombospondin-1Thrombospondin-2TNF-alpha 
TNF RI/TNFRSF1A   TRAIL/TNFSF10     
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Featured Publication

Racial disparity in microvascular function among women with newly diagnosed breast cancer

CRS Monitoring for CAR-T, TCR, NK and other Cell Therapies

With low sample-volume requirements, high sensitivity, and results in 90 minutes or less, the Ella system enables rapid measurement of cytokine associated with immune activation, supporting research into Cytokine Response Syndrome (CRS) and immune effector cell-associated HLH-like syndrome (IEC-HS) following cell therapy treatments.

Relevant Simple Plex Assays 

Human Analytes 
CCL2/JE/MCP-1CCL4/MIP-1 betaCXCL9/MIGCXCL10/IP-10
GM-CSFIFN-gammaIL1betaIL-2 
IL-6 IL-8 IL-10 IL-15 
IL-18 TNF-alphaAngiopoietin -1Angiopoietin -2
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Featured Publication

Tumor Microenvironment Composition and Severe Cytokine Release Syndrome (CRS) Influence Toxicity in Patients with Large B-Cell Lymphoma Treated with Axicabtagene Ciloleucel

Epithelial–Mesenchymal Transition (EMT) & Metastasis

Epithelial–mesenchymal transition and metastasis encompass the signals and effectors that enable tumor cells to lose adhesion, invade, and spread to distant sites. Simple Plex assays cover several key facets of this process: loss of epithelial adhesion and mesenchymal remodeling, EMT-inducing signals from the microenvironment, matrix degradation and invasion machinery and mediators of migration and metastatic colonization.

Relevant Simple Plex Assays: 

Human Analytes 
E-CadherinChitinase 3-like 1/YKL-40CTGF/CCN2CXCL12/SDF-1alpha
Cytokeratin 18FibronectinFollistatinHGF
HGF R/c-METLipocalin-2/NGALMMP-7MMP-8
MMP-9OsteopontinuPARPeriostin/OSF-2
u-Plasminogen / uPASyndecan-1TGF-beta 1TIMP-1
TIMP-2   
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Immune Checkpoints and Immunotherapy Response

Profiling immune checkpoint proteins and other immune-regulatory markers can help characterize tumor–immune interactions, T-cell activation and exhaustion, and mechanisms associated with immunotherapy response or resistance. Longitudinal monitoring of systemic and local immune responses can further reveal changes in immune activity and inflammatory signaling, supporting the identification of biomarkers and pathways associated with therapeutic response and immune evasion.

Relevant Simple Plex Assays: 

Human Analytes 
CD27/TNFRSF7CD28CD40CD40 Ligand
CD155/PVRCTLA-4 CXCL9/MIGCXCL10/IP-10
FasFas LigandGalectin-3Galectin-9
HVEM/TNFRSF14IFN-gammaIL-1betaIL-6
IL-8/CXCL8IL-10IL-12 p 70LAG-3
LIGHT/TNFSF14Nectin-2/CD112OX40/TNFRSF4PD-1
PD-L1/B7-H1PD-L2TGF-betaTIM-3
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Featured Publications

Identification of prognostic liquid biopsy biomarkers in patients with cutaneous squamous cell carcinoma treated with cemiplimab

Microbiome-Immune Interaction

The gut microbiota is increasingly recognized as an important modulator of antitumor immunity and immunotherapy response through its effects on systemic immunity and the tumor microenvironment. Beneficial commensals can promote antitumor cytokines and T-cell recruiting chemokines, shifting tumors towards an immunologically “hot” phenotype, immunotherapy-responsive target. Conversely, dysbiosis and barrier disruption can activate suppressive pathways, regulatory immune cells, and myeloid-mediated resistance to immune checkpoint blockade.

Relevant Simple Plex Assays: 

Human Analytes 
CCL2/MCP1CXCL9/MIGCXCL10/IP-10CXCL12/SDF-1alpha
CTLA-4IL1betaIL-2IL-6
IL-8/CXCL8IL-10IL-12 p70IL-17A
IL-22PD-1PD-L1/B7-H1PD-L2/B7-DC
TNF-alphaTGF-beta 1  
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Featured Publication

CCL2: A Pro-Inflammatory Driver and Candidate Diagnostic Biomarker in Colorectal Cancer Patients

Tumor Microenvironment (TME)

The tumor microenvironment is shaped by cytokines, chemokines, growth factors, and immune-cell signaling molecules that regulate inflammation, immune activation, immunosuppression, angiogenesis, and treatment response. Profiling these soluble mediators across biological samples and experimental models can help characterize tumor–immune interactions, identify resistance mechanisms, and evaluate treatment-associated changes.

Relevant Simple Plex Assays: 

Human Analytes 
CCL2/MCP-1CCL3/MIP-1alphaCCL4/MIP-1betaCCL5/RANTES
CXCL9/MIGCXCL10/IP-10CXCL13/BLC/BCA-1FAP
FibronectinGalectin-1Galectin-3Galectin-9
GM-CSFG-CSFIFN-gammaIL1beta
IL-2IL-6IL-8/CXCL8IL-10
IL-12 p70IL-15IL-17AIL-18
Periostin/OSF-2Syndecan-1Syndecan-4TGF-beta 1   
TGF-beta 1   TNF-alphaVEGF-A 
Mouse Analytes   
CCL2/MCP-1 CCL3/MIP-1alpha CCL5/RANTES CXCL10/IP-10 
CXCL13/BLC/BCA-1   GM-CSF G-CSF IFN-gamma
IL1betaIL-2 IL-6 IL-12 p70
IL-17 IL-18 TGF-beta 1   TNF-alpha 
VEGF-A   
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Featured Publication

Sex-related differences in serum biomarker levels predict the activity and efficacy of immune checkpoint inhibitors in advanced melanoma and non-small cell lung cancer patients

Tumor-associated Biomarkers

Soluble tumor-associated proteins serve as dynamic indicators of tumor biology, therapeutic response, and immune engagement. Quantifying these circulating antigens accelerates translational biomarker discovery and validation, directly mapping systemic proteomic signatures to tumor burden, immune evasion pathways, and therapeutic efficacy.

Relevant Simple Plex Assays: 

Human Analytes 
AFPAxlBCMACA125/MUC16
DKK-1ErbB2/Her2E-CadherinFAP 
Galectin-1 HE4/WFDC HGF R/c-M Mesothelin 
MICAMMP-7MMP-8MMP-9
OsteopontinNeprilysin/CD10VCAM-1 
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Featured Publication

Analytical assessment and validation of the Ella serum B-cell maturation antigen assay

Assay Validation for Cancer Research

Ella system’s automated microfluidic platform serves as a reliable engine for orthogonal protein validation in oncology research. By providing precise quantification of biomarkers identified through multiplex discovery screening, spatial biology, and/or omics studies, Ella’s automated assays bridge the gap between initial target identification and analytical qualification. The system generates highly reproducible, quantitative data suitable for training predictive machine-learning models.

Relevant Simple Plex Assays: 

Human Analytes 
CCL2/MCP-1CCL3/MIP-1alphaCCL4/MIP-1betaCCL5/RANTES
CXCL9/MIGCXCL10/IP-10GM-CSFGranzyme B
IFN-gammaIL1betaIL-2IL-6
IL-8/CXCL8IL-10IL-12 p70IL-15
IL-17AIL-18TGF-beta 1 TNF-alpha
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Selected Publications by Cancer Type

Solid Tumors
Ovarian

Han C, et. al. A novel multiple biomarker panel for the early detection of high-grade serous ovarian carcinoma. Gynecol Oncol. 2018 Jun;149(3):585-591. doi: 10.1016/j.ygyno.2018.03.050. Epub 2018 Mar 21. PMID: 29572027

Walker C, et al. Automated Assay of a Four-Protein Biomarker Panel for Improved Detection of Ovarian Cancer. Cancers (Basel). 2021 Jan 17;13(2):325. doi: 10.3390/cancers13020325. PMID: 33477343

Lung (NSCLC)Pecci F, et. al. Dissecting the impact of Controlling Nutritional Status (CONUT) score on survival outcomes and immune-inflammatory profiles in patients with advanced NSCLC undergoing first-line immunotherapy. J Immunother Cancer. 2026 Jan 5;14(1):e013045. doi: 10.1136/jitc-2025-013045. PMID: 41494746
 Adamo A, et. al. Immune checkpoint blockade therapy mitigates systemic inflammation and affects cellular FLIP-expressing monocytic myeloid-derived suppressor cells in non-progressor non-small cell lung cancer patients. Oncoimmunology. 2023 Sep 14;12(1):2253644. doi: 10.1080/2162402X.2023.2253644. PMID: 37720688
Head & Neck (HNSCC)Merlano MC, et. al. Multimodality immunotherapy with avelumab, short-course radiotherapy, and cyclophosphamide in head and neck cancer: the CONFRONT phase I-II trial. ESMO Open. 2025 Apr;10(4):104498. doi: 10.1016/j.esmoop.2025.104498. Epub 2025 Mar 14. PMID: 40088800
 Merlano MC, et. al. Baseline Values of Circulating IL-6 and TGF-β Might Identify Patients with HNSCC Who Do Not Benefit from Nivolumab Treatment. Cancers (Basel). 2023 Nov 2;15(21):5257. doi: 10.3390/cancers15215257. PMID: 37958430
Liver (HCC)Zhang X, et. al. Prediagnostic plasma proteomics profile for hepatocellular carcinoma. J Natl Cancer Inst. 2024 Aug 1;116(8):1343-1355. doi: 10.1093/jnci/djae079. PMID: 38688524
 Lin M, et. al. Lytic efficiency of immunosuppressive drug-resistant armoured T cells against circulating HBV-related HCC in whole blood. Immunother Adv. 2023 Aug 14;3(1):ltad015. doi: 10.1093/immadv/ltad015. PMID: 37636242
ColorectalMelero I, et.al. Cibisatamab and FAP-4-1BBL in microsatellite-stable colorectal cancer: a phase 1b trial. Nat Med. 2026 Apr 20. doi: 10.1038/s41591-026-04380-z. PMID: 42010119
 Abbona A,et.al. Baseline Cytokine Profile Identifies a Favorable Outcome in a Subgroup of Colorectal Cancer Patients Treated with Regorafenib. Vaccines (Basel). 2023 Feb 2;11(2):335. doi: 10.3390/vaccines11020335. PMID: 36851213
ProstateWise DR, et. al. Dickkopf-1 Can Lead to Immune Evasion in Metastatic Castration-Resistant Prostate Cancer. JCO Precis Oncol. 2020 Sep 29;4:PO.20.00097. doi: 10.1200/PO.20.00097. PMID: 33015525
 Frieling JS, et. al. γδ-Enriched CAR-T cell therapy for bone metastatic castrate-resistant prostate cancer. Sci Adv. 2023 May 3;9(18):eadf0108. doi: 10.1126/sciadv.adf0108. PMID: 37134157
MelanomaGérard A, et. al. Baseline and early functional immune response is associated with subsequent clinical outcomes of PD-1 inhibition therapy in metastatic melanoma patients. J Immunother Cancer. 2021 Jun;9(6):e002512. doi: 10.1136/jitc-2021-002512. PMID: 34088741
 Pasello G, et. al. Sex-related differences in serum biomarker levels predict the activity and efficacy of immune checkpoint inhibitors in advanced melanoma and non-small cell lung cancer patients. J Transl Med. 2024 Mar 5;22(1):242. doi: 10.1186/s12967-024-04920-6. PMID: 38443899
Breast

Suhail M. Ali et al. Serum biomarkers of inflammation (ferritin, IL-8, TNFR1) and outcomes in BOLERO-2, a phase III trial of HR+/HER2- metastatic breast cancer treated with everolimus (mTOR inhibitor).. J Clin Oncol 38, 1067-1067(2020).

DOI:10.1200/JCO.2020.38.15_suppl.1067

 

Ornella Garrone et al. Moderate physical exercise and immune system modulation in patients with breast cancer treated with neoadjuvant chemotherapy.. J Clin Oncol 41, 605-605(2023).

DOI:10.1200/JCO.2023.41.16_suppl.605

BrainChiavelli C, et. al. Autologous anti-GD2 CAR T cells efficiently target primary human glioblastoma. NPJ Precis Oncol. 2024 Feb 1;8(1):26. doi: 10.1038/s41698-024-00506-z. PMID: 38302615
 Locatelli F, et.al. GD2-targeting CAR T cells in high-risk neuroblastoma: a phase 1/2 trial. Nat Med. 2025 Nov;31(11):3689-3699. doi: 10.1038/s41591-025-03874-6. Erratum in: Nat Med. 2025 Nov;31(11):3933. doi: 10.1038/s41591-025-03996-x. PMID: 40841488
RenalYuen KC. High systemic and tumor-associated IL-8 correlates with reduced clinical benefit of PD-L1 blockade. Nat Med. 2020 May;26(5):693-698. doi: 10.1038/s41591-020-0860-1. Epub 2020 May 11. Erratum in: Nat Med. 2021 Mar;27(3):560. doi: 10.1038/s41591-021-01246-4. PMID: 32405063
MesotheliomaLofiego MF, et. al. DNA methylation status classifies pleural mesothelioma cells according to their immune profile: implication for precision epigenetic therapy. J Exp Clin Cancer Res. 2025 Feb 18;44(1):58. doi: 10.1186/s13046-025-03310-0. PMID: 39966970
 Mazzaschi G, et. al. Prognostic immunoinflammatory and transcriptomic profiles in patients with pleural mesothelioma undergoing immunotherapy. Immunotherapy. 2025 Aug;17(12):879-890. doi: 10.1080/1750743X.2025.2549240. Epub 2025 Aug 20. PMID: 40833332
Endometrial/CervicalVaccarella S, et. al. Dissecting endometrial cancer complexity in response to standard and targeted therapies. Cell Death Dis. 2025 Nov 28;16(1):873. doi: 10.1038/s41419-025-08051-8. PMID: 41315187
PancreaticFan YY, Liu YL, Liu XF, Jiang SQ, Yang H, Zhang HR, Wei P, Huang QR. Preclinical evaluation of CAR-T cell immunotherapy with a fully human EpCAM-specific scFv against pancreatic cancer. Cancer Immunol Immunother. 2025 Dec 19;75(1):22. doi: 10.1007/s00262-025-04267-x. PMID: 41417221

Hematological Malignancies
LymphomaMoskowitz AJ, et.al. Prognostic significance of baseline metabolic tumor volume in relapsed and refractory Hodgkin lymphoma. Blood. 2017 Nov 16;130(20):2196-2203. doi: 10.1182/blood-2017-06-788877. PMID: 28874350
Leukemia

Aghel N, et. al. High sensitivity c-reactive protein and circulating biomarkers of endothelial dysfunction in patients with chronic myeloid leukemia receiving tyrosine kinase inhibitors. Leuk Lymphoma. 2023 Dec;64(12):2008-2017. doi: 10.1080/10428194.2023.2242990. Epub 2023 Aug 9. PMID: 37554059

Boucher JC, et. al. Bispecific CD33/CD123 targeted chimeric antigen receptor T cells for the treatment of acute myeloid leukemia. Mol Ther Oncolytics. 2023 Nov 20;31:100751. doi: 10.1016/j.omto.2023.100751. PMID: 38075241

Multiple MyelomaDi Meo F, et. al. Developing SEMA4A-directed CAR T cells to overcome low BCMA antigen density in multiple myeloma. Cancer Cell. 2025 Dec 8;43(12):2298-2310.e6. doi: 10.1016/j.ccell.2025.09.007. Epub 2025 Oct 9. PMID: 41072416
 Firestone RS, et. al. Antigen escape as a shared mechanism of resistance to BCMA-directed therapies in multiple myeloma. Blood. 2024 Jul 25;144(4):402-407. doi: 10.1182/blood.2023023557. PMID: 38728378

Resources

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Immunology and Inflammation
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Explore additional Simple Plex applications for profiling cytokines, chemokines, and other immune-related biomarkers across inflammation and immunology research.