Histone Deacetylases

There are 18 Histone Deacetylase (HDAC) enzymes that are classified into two groups, the histone deacetylase family and the sirtuin family. The histone deacetylase family is divided into classes I, II and IV.

There are 18 Histone deacetylases (HDAC) enzymes that are classified in to two families, the histone deacetylase family and the sirtuin family. The histone deacetylase family is further divided in to class I (HDACs 1/2/3 and 8), class II (HDACs 4/5/6/7/9/10) and class IV (HDAC 11). The sirtuin family are all classified as class III HDACs. HDACs catalyze acetyl group removal from lysine residues in histones and non-histone proteins, causing transcriptional repression. In general, they do not act autonomously but as components of large multiprotein complexes, such as pRb-E2F and mSin3A, that mediate important transcription regulatory pathways.

Classes I, II and IV, are closely related Zn2+-dependent enzymes, which are ubiquitously expressed and they can exist in the nucleus or cytosol. Their subcellular localization is affected by protein-protein interactions (for example HDAC-14.3.3 complexes are retained in the cytosol) and by the class to which they belong (class 1 HDACs are predominantly nuclear whilst class 2 HDACs shuttle between the nucleus and cytosol). HDACs have a role in cell growth arrest, differentiation and death and this has led to substantial interest in HDAC inhibitors as possible antineoplastic agents.

Histone acetylation - a key epigenetic process - is upregulated during memory formation but downregulated in numerous neurodegenerative diseases, such as Alzheimer's disease and Huntington's disease. As a result, HDAC inhibitors are also of great interest in neuroscience research.

Literature

Huntington's Disease Research Product Guide

Huntington's Disease Research Product Guide

This product guide provides a background to Huntington's disease research and lists around 100 products for the study of:

  • Somatic Instability
  • Proteolysis and Inclusion Bodies
  • Transcriptional Dysregulation
  • Mitochondrial Dysfunction
  • Nuclear-Cytoplasmic Transport Interference
  • Excitotoxicity
  • Stem Cells

Enzyme Data

Histone Deacetylase Gene Data

GeneSpeciesGene SymbolGene Accession No.Protein Accession No.
Class 1
HDAC1HumanHDAC1NM_004964Q13547
MouseHdac1NM_008228O09106
RatHdac1NM_001025409Q4QQW4
HDAC2HumanHDAC2NM_001527Q92769
MouseHdac2NM_008229P70288
RatHdac2NM_053447Q99PA1
HDAC3HumanHDAC3NM_003883O15379
MouseHdac3NM_010411O88895
RatHdac3NM_053448Q6P6W3
HDAC8HumanHDAC8NM_018486Q9BY41
MouseHdac8NM_027382Q8VH37
RatHdac8NM_001126373XP_343805
Class 2
HDAC4HumanHDAC4NM_006037P56524
MouseHdac4NM_207225Q6NZM9
RatHdac4XM_343629Q99P99
HDAC5HumanHDAC5NM_001015053Q9UQL6
MouseHdac5NM_001077696Q9Z2V6
RatHdac5XM_001081495Q5RJZ2
HDAC6HumanHDAC6NM_006044Q9UBN7
MouseHdac6NM_010413Q9Z2V5
RatHdac6XM_228753Q99P97
HDAC7HumanHDAC7NM_016596Q9UFU7
MouseHdac7NM_019572Q8C2B3
RatHdac7aXM_345868Q99P96
HDAC9HumanHDAC9NM_058177Q9UKV0
MouseHdac9NM_024124Q99N13
HDAC10HumanHDAC10NM_032019Q969S8
MouseHdac10NM_199198Q6P3E7
RatHdac10NM_001035000Q569C4
Class 4
HDAC11HumanHDAC11NM_024827Q96DB2
MouseHdac11NM_144919Q91WA3
RatHdac11NM_001106610XP_238362